I had a number of domains all running on one host when I first set them up with certbot. One started to be serious, so I moved it to another host and ran certbot there. That all worked perfectly, but of course, the old domain is still part of the original certificate, so when I went to renew it, it came up with some errors.
Here’s a few commands that are going to help navigate this situation if you’ve found yourself in the same spot:
I’ve been managing SSL certificates for my domains purchased from PorkBun by going there every 90 days downloading the certificates, joining them together to make the fullchain.pem then scp-ing them to my servers. That’s been sort of manageable, but less than ideal.
It also doesn’t work for my Australian domains. Since there’s strict rules about who can own a domain in the .au space (you have to have some sort of right to the name - a random person can’t obtain the coke.com.au domain unless that’s a trading name, a trademark, or something similar), they have to be managed by one of about eight organisations, and the offerings are much simpler.